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Putative Sphingomonas species FARSPH RM systems
Ref: Bendezu Eguis,J. et al. unpublished
REBASE ref # 28231
Sequence length: | GenBank #: | |
Chromosome: | 3,345,474 bp | CP029985 |
plasmid unnamed2: | 265,221 bp | CP029986 |
REBASE acronym: SspRSPH
Org_num: 30402
All begin DM480_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5855 | 193 aa hypothetical protein | |||
5860 | R | Psp29334ORF21590P (66% identity) | TGANNNNNNNGTCC | SspRSPHIP |
5865 | S | S.Ssp34061ORFBP (34% identity) | TGANNNNNNNGTCC | S.SspRSPHI |
5870 | 200 aa hypothetical protein | |||
5875 | M | M.AspTH136ORF5855P (77% identity) | TGANNNNNNNGTCC | M.SspRSPHI |
5880 | IS66 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
7915 | ribonuclease HII | |||
7920 | M | M.Sin12872ORFCP (83% identity) | GANTC | M.SspRSPHII |
7925 | dihydropteroate synthase | |||
8995 | TonB-dependent receptor | |||
9000 | RM | Sspzrk23ORF5020P (66% identity) | SspRSPHORF9000P | |
9005 | 132 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3550 | recombinase family protein | |||
3555 | M | M.Asp13ORF9978P (69% identity) | M.SspRSPHORF3555P | |
3560 | R | AatORFBP (90% identity) | SspRSPHORF3555P | |
3565 | 110 aa hypothetical protein | |||
plasmid unnamed2 | ||||
15940 | chromosome partitioning protein | |||
??? | M | M.AprL41AORFIP (26% identity) | M.SspRSPHORFAP | |
15950 | chromosome partitioning protein |