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Putative Escherichia coli H8Ecoli RM systems
Ref: Zheng,B. unpublished
REBASE ref # 23767
Sequence length: | GenBank #: | |
Chromosome: | 4,743,004 bp | CP029212 |
plasmid p2-H8: | 124,242 bp | CP029213 |
plasmid p3-H8: | 95,649 bp | CP029214 |
plasmid pMCR-H8: | 203,941 bp | CP029215 |
REBASE acronym: EcoH8E
Org_num: 29102
All begin DEP49_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21015 | 322 aa hypothetical protein | |||
21020 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoH8EORF21025P |
21025 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoH8EORF21025P |
??? | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoH8EORF21025P |
21040 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1825 | cell division protein DamX | |||
1830 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoH8EDamP |
1835 | ribulose-phosphate 3-epimerase | |||
2385 | DUF2556 domain-containing protein | |||
2390 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoH8EORF2390P |
2395 | Fis family transcriptional regulator | |||
9605 | phosphohydrolase | |||
9610 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoH8EDcmP |
9615 | V | V.EcosPA11DcmP (100% identity) | V.EcoH8EDcmP | |
9620 | drug/metabolite exporter YedA | |||
plasmid p2-H8 | ||||
24695 | 73 aa hypothetical protein | |||
24700 | M | M.Sso11ORF329P (100% identity) | M.EcoH8EORF24700P | |
24705 | 101 aa hypothetical protein | |||
plasmid p3-H8 | ||||
25465 | 101 aa hypothetical protein | |||
25470 | M | M.SflN92ORF24820P (100% identity) | M.EcoH8EORF25470P | |
25475 | 73 aa hypothetical protein | |||
plasmid pMCR-H8 | ||||
26465 | DUF1173 domain-containing protein | |||
26470 | M | M.YpsF1ORFCP (100% identity) | M.EcoH8EORF26470P | |
26475 | thermonuclease family protein | |||
26930 | 108 aa hypothetical protein | |||
26935 | M | M.YpsF1ORFBP (100% identity) | M.EcoH8EORF26935P | |
26940 | 202 aa hypothetical protein | |||
27035 | DNA-binding protein | |||
27040 | M | M.YpsF1ORFDP (100% identity) | M.EcoH8EORF27040P | |
27045 | 284 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21270 | HNH endonuclease | |||
21275 | R | SflN101McrBP (100% identity) | EcoH8EMcrBP | |
21280 | R | SflN101McrCP (100% identity) | EcoH8EMcrCP | |
21285 | 128 aa hypothetical protein |