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Putative Leclercia species LSNIH1 RM systems
Ref: Weingarten,R.A. et al. unpublished
REBASE ref # 26066
Sequence length: | GenBank #: | |
Chromosome: | 4,832,521 bp | CP026167 |
plasmid pKPC-79f0: | 58,627 bp | CP026169 |
plasmid pLEC-1cb1: | 341,250 bp | CP026171 |
REBASE acronym: LspNIH1
Org_num: 27339
All begin C2U54_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23210 | 119 aa hypothetical protein | |||
23215 | M | M.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | M.LspNIH1I |
23220 | S | S.Sma95ORF3770P (100% identity) | GTAYNNNNGTG | S.LspNIH1I |
23225 | R | LadG426ORF18140P (99% identity) | GTAYNNNNGTG | LspNIH1IP |
23230 | 197 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1210 | replication protein | |||
1215 | M | M.LadE61ORF18315P (74% identity) | M.LspNIH1ORF1215P | |
1220 | 63 aa hypothetical protein | |||
1400 | 98 aa hypothetical protein | |||
1405 | M | M.LadE61ORF20595P (88% identity) | M.LspNIH1ORF1405P | |
1410 | 77 aa hypothetical protein | |||
2900 | ribulose-phosphate 3-epimerase | |||
2905 | M | M.LspC189DamP (94% identity) | GATC | M.LspNIH1DamP |
2910 | cell division protein DamX | |||
7470 | 360 aa hypothetical protein | |||
7475 | R | Ebu7ORF2655P (87% identity) | LspNIH1ORF7480P | |
7480 | M | M.Eco4502ORFEP (85% identity) | M.LspNIH1ORF7480P | |
7485 | V | V.Lad320ORF10870P (76% identity) | V.LspNIH1ORF7480P | |
7490 | SAM-dependent methyltransferase | |||
13840 | 138 aa hypothetical protein | |||
13845 | M | M.KpnF32PORF16000P (74% identity) | M.LspNIH1ORF13845P | |
13850 | ATP-binding protein | |||
15790 | 85 aa hypothetical protein | |||
15795 | M | M.LspG3LORF19560P (99% identity) | M.LspNIH1ORF15795P | |
15800 | 110 aa hypothetical protein | |||
19530 | drug/metabolite exporter YedA | |||
19535 | V | V.LspC189DcmP (100% identity) | V.LspNIH1DcmP | |
19540 | M | M.Lsp6151DcmP (98% identity) | CCWGG | M.LspNIH1DcmP |
19545 | phosphohydrolase | |||
plasmid pKPC-79f0 | ||||
24300 | resolvase | |||
24305 | R | YpsR1ORFAP (99% identity) | CCWGG | LspNIH1ORF24310P |
24310 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.LspNIH1ORF24310P |
24315 | IS1 family transposase | |||
plasmid pLEC-1cb1 | ||||
25205 | 273 aa hypothetical protein | |||
25210 | M | M1.PspNIH2ORF20995P (100% identity) | M.LspNIH1ORF25210P | |
25215 | DNA-binding protein | |||
25600 | 203 aa hypothetical protein | |||
25605 | M | M.SenZC055ORF24890P (100% identity) | M.LspNIH1ORF25605P | |
25610 | 102 aa hypothetical protein | |||
26390 | nuclease | |||
26395 | M | M.SenZC055ORF26240P (100% identity) | M.LspNIH1ORF26395P | |
26400 | 56 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21065 | 94 aa hypothetical protein | |||
21070 | M | M.CspC18ORF6875P (98% identity) | M.LspNIH1ORF21070P | |
21075 | R | KpnM1862ORFAP (98% identity) | LspNIH1ORF21070P | |
21080 | prepilin-type N-terminal cleavage/methylation | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
7560 | aminobutyraldehyde dehydrogenase | |||
7565 | R | Lad320McrCP (94% identity) | LspNIH1McrCP | |
7570 | R | Lad320McrBP (48% identity) | LspNIH1McrBP | |
7575 | IS5-like element ISKpn26 family transposase |