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Putative Prevotella intermedia KCOM 2837 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
Sequence length: | GenBank #: | |
chromosome 1: | 2,064,201 bp | CP024723 |
chromosome 2: | 825,849 bp | CP024724 |
REBASE acronym: Pin2837
Org_num: 26581
All begin CTM62_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
2920 | transcriptional regulator | |||
2925 | R | Pbu13063ORF173P (100% identity) | Pin2837ORF2930P | |
2930 | M | M.Pbu13063ORF2589P (100% identity) | M.Pin2837ORF2930P | |
2935 | 384 aa hypothetical protein | |||
2940 | 155 aa hypothetical protein | |||
2945 | S | S2.Pbu13063ORF2589P (42% identity) | S1.Pin2837ORF2930P | |
2950 | S | S2.Pbu13063ORF173P (55% identity) | S2.Pin2837ORF2930P | |
2955 | integrase | |||
2960 | S | S2.Pin2837ORF2930P (95% identity) | S3.Pin2837ORF2930P | |
2965 | 0 aa hypothetical protein | |||
3845 | NTPase | |||
3850 | R | Pma19339ORFBP (97% identity) | Pin2837ORF3885P | |
3855 | 396 aa hypothetical protein | |||
3860 | S | S.PmeOORF6123P (37% identity) | S1.Pin2837ORF3885P | |
3865 | cell filamentation protein Fic | |||
3870 | S | S3.Ppa13043ORF547P (82% identity) | GGANNNNNNTGA | S2.Pin2837ORF3885P |
3875 | S | S1.PmeBin13ORFIP (76% identity) | S3.Pin2837ORF3885P | |
3880 | integrase | |||
3885 | M | M.PmeOORF6123P (96% identity) | M.Pin2837ORF3885P | |
3890 | C | C.PmeOORF6123P (94% identity) | C.Pin2837ORF3885P | |
3895 | 220 aa hypothetical protein | |||
4885 | integrase | |||
4890 | C | C.Tfo10960ORF2245P (100% identity) | C.Pin2837ORF4895P | |
4895 | M | M.Tfo10960ORF2245P (89% identity) | M.Pin2837ORF4895P | |
4900 | S | S.Tfo10960ORF2245P (53% identity) | S.Pin2837ORF4895P | |
4905 | 575 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
4980 | XRE family transcriptional regulator | |||
4985 | M | M.Pde1525II (97% identity) | CTSAG | M.Pin2837I |
4990 | SAM-dependent DNA methyltransferase | |||
4985 | site-specific DNA-methyltransferase | |||
4990 | RM | Pin2836ORF3495P (92% identity) | Pin2837ORF4990P | |
4995 | ABC transporter ATP-binding protein | |||
5775 | nicotinate phosphoribosyltransferase | |||
5780 | R | Pin2833ORF6200P (100% identity) | Pin2837ORF5790P | |
5785 | 73 aa hypothetical protein | |||
5790 | M | M.Pin2833ORF6200P (100% identity) | M.Pin2837ORF5790P | |
5795 | RNA methyltransferase | |||
6220 | 146 aa hypothetical protein | |||
??? | M | M.Pin1944ORF8530P (67% identity) | M.Pin2837ORF6225P | |
6235 | 174 aa hypothetical protein | |||
6265 | 123 aa hypothetical protein | |||
6270 | M | M.Pin1944ORF8490P (95% identity) | M.Pin2837ORF6270P | |
6275 | 108 aa hypothetical protein | |||
6405 | 5-formyltetrahydrofolate cyclo-ligase | |||
6410 | M | M.PcoFMU4ORFHP (81% identity) | M.Pin2837ORF6410P | |
6415 | 132 aa hypothetical protein | |||
chromosome 2 | ||||
9445 | 397 aa hypothetical protein | |||
9450 | M | M.Pin14ORF352P (97% identity) | M.Pin2837ORF9450P | |
9455 | 108 aa hypothetical protein | |||
10480 | 0 aa hypothetical protein | |||
10485 | C | C.Pin2834ORF6715P (100% identity) | C.Pin2837IIP | |
10490 | M | M1.Pin2834ORF6715P (100% identity) | GCATC | M1.Pin2837II |
10495 | M | M2.Pin2834ORF6715P (100% identity) | GCATC | M2.Pin2837II |
10500 | R | Pin2834ORF6715P (100% identity) | GCATC | Pin2837IIP |
10505 | transcriptional regulator | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 2 | ||||
9345 | polyketide cyclase | |||
9350 | R | Pin2836McrCP (97% identity) | Pin2837McrCP | |
??? | R | Pin2838McrBP (98% identity) | Pin2837McrBP | |
9360 | aspartate 1-decarboxylase |