Escherichia coli D6 |
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Putative Escherichia coli D6 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 4,711,358 bp
GenBank #: CP010148
REBASE acronym: EcoD6
Org_num: 21869
All begin RG39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6910 | restriction endonuclease | |||
| 6915 | M | M.Esp9308ORFIP (100% identity) | M.EcoD6ORF6915P | |
| 6920 | S | S.EcoYZ311ORF11340P (100% identity) | S.EcoD6ORF6915P | |
| 6925 | R | EcoYZ311ORF11340P (100% identity) | EcoD6ORF6915P | |
| 6930 | endoribonuclease SymE | |||
| 8315 | transposase | |||
| 8320 | R | EcotcmA3ORF16550P (100% identity) | EcoD6ORF8340P | |
| 8325 | DNA transporter | |||
| 8330 | ATP-dependent DNA helicase RecG | |||
| 8335 | S | S.Pre393ORF2750P (100% identity) | S.EcoD6ORF8340P | |
| 8340 | M | M.Pre393ORF2750P (100% identity) | M.EcoD6ORF8340P | |
| 8345 | MerR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3640 | LexA family transcriptional regulator | |||
| 3645 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.EcoD6ORF3645P |
| 3650 | 162 aa hypothetical protein | |||
| 12145 | cell division protein DamX | |||
| 12150 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoD6DamP |
| 12155 | ribulose-phosphate 3-epimerase | |||
| 12780 | 59 aa hypothetical protein | |||
| 12785 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoD6ORF12785P |
| 12790 | Fis family transcriptional regulator | |||
| 19770 | hydrolase | |||
| 19775 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoD6DcmP |
| 19780 | V | V.SsoSE61DcmP (100% identity) | V.EcoD6DcmP | |
| 19785 | multidrug DMT transporter | |||