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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033866 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 5,043,047 bp
GenBank #: LVGM00000000 (NZ_LVGM00000000)
REBASE acronym: Sen33866
Org_num: 21342
All begin AIZ11_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
23990 | S | restriction endonuclease subunit S, partial | S.Sen33866ORF23995P | |
23995 | M | M.StyLTIII (100% identity) | M.Sen33866ORF23995P | |
24000 | R | StyLT2IIP (99% identity) | Sen33866ORF23995P | |
23500 | 540 aa hypothetical protein | |||
23505 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sen33866ORF23510P |
23510 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sen33866ORF23510P |
23515 | R | Sen33852ORF15545P (100% identity) | TGANNNNNNCTTC | Sen33866ORF23510P |
23520 | transposase | |||
10075 | 110 aa hypothetical protein | |||
10080 | S | restriction endonuclease subunit S, partial | CRTAYNNNNNNCTC | S.Sen33866ORF10080P |
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
21605 | 73 aa hypothetical protein | |||
21610 | M | M.StyUK1ORFAP (100% identity) | M.Sen33866ORF21610P | |
21615 | 62 aa hypothetical protein | |||
21810 | 79 aa hypothetical protein | |||
21815 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen33866ORF21815P |
21820 | exonuclease | |||
21450 | multidrug DMT transporter | |||
21455 | V | V.StyUK1DcmP (100% identity) | V.Sen33866DcmP | |
21460 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33866DcmP |
21465 | hydrolase | |||
20885 | Fis family transcriptional regulator | |||
20890 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33866ORF20890P |
20895 | 54 aa hypothetical protein | |||
7525 | 207 aa hypothetical protein | |||
7530 | M | M.Sen33859ORF15885P (100% identity) | GATC | M.Sen33866ORF7530P |
7535 | 59 aa hypothetical protein | |||
9915 | 363 aa hypothetical protein | |||
9920 | RM | M.StyUK1IV (100% identity) | GATCAG | Sen33866ORF9920P |
9925 | DNA repair protein | |||
7095 | 157 aa hypothetical protein | |||
??? | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen33866ORF7100P |
7105 | crossover junction endodeoxyribonuclease | |||
1645 | cell division protein DamX | |||
1650 | M | M.StyTDamP (100% identity) | GATC | M.Sen33866DamP |
1655 | ribulose phosphate epimerase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
14110 | 33 aa hypothetical protein | |||
14115 | R | StyUK1IP (99% identity) | CAGAG | Sen33866ORF14120P |
14120 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33866ORF14120P |
14125 | pseudogene |