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Putative Citrobacter freundii B38 RM systems
Ref: Hawkey,P.M. et al. FEMS Microbiol. Lett. 194 (1), 53-57 (2001)
REBASE ref # 22391
Sequence length: | GenBank #: | |
Chromosome: | 5,134,500 bp | CP016762 |
plasmid pOZ172: | 127,005 bp | CP016763 |
plasmid pOZ181: | 277,592 bp | CP016764 |
REBASE acronym: CfrB38
Org_num: 19842
All begin CfB38_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1932 | 388 aa hypothetical protein | |||
1933 | M | M.Cfr965ORF9395P (100% identity) | CTCANNNNNNRTAY | M.CfrB38III |
1934 | S | S.Cfr965ORF9395P (100% identity) | CTCANNNNNNRTAY | S.CfrB38III |
1935 | 227 aa hypothetical protein | |||
1936 | cold-shock protein | |||
1937 | R | Cfr8049ORF8925P (100% identity) | CTCANNNNNNRTAY | CfrB38IIIP |
1938 | metal-dependent hydrolase | |||
4248 | 883 aa hypothetical protein | |||
4249 | R | Csp986ORF20575P (100% identity) | GAAGNNNNNCTG | CfrB38IVP |
4250 | S | S.Csp986ORF20575P (61% identity) | GAAGNNNNNCTG | S.CfrB38IV |
4251 | M | M.Cfr4P1ORF39550P (95% identity) | GAAGNNNNNCTG | M.CfrB38IV |
4252 | 195 aa hypothetical protein | |||
plasmid pOZ172 | ||||
5127 | Uncharacterized protein | |||
5001 | R | Kpns57ORF27125P (100% identity) | GATGNNNNNNNTCG | CfrB38IIP |
5002 | S | S.Ror431I (100% identity) | GATGNNNNNNNTCG | S.CfrB38II |
5003 | M | M.Kpn9960ORFFP (100% identity) | GATGNNNNNNNTCG | M.CfrB38II |
5004 | 576 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
325 | cell division protein DamX | |||
326 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrB38DamP |
327 | ribulose-phosphate 3-epimerase | |||
427 | 54 aa hypothetical protein | |||
428 | M | M.CspMGH103ORFEP (99% identity) | ATGCAT | M.CfrB38I |
429 | Fis family transcriptional regulator | |||
1057 | GntR family transcriptional regulator | |||
1058 | M | M2.Cfr5125ORF15595P (99% identity) | GATC | M.CfrB38ORF1058P |
1059 | DNA C-5-cytosine methyltransferase | |||
1058 | DNA N-6-adenine methyltransferase | |||
1059 | M | M1.Cfr5125ORF15595P (100% identity) | M.CfrB38ORF1059P | |
1060 | crossover junction endodeoxyribonuclease | |||
1066 | IS3 family transposase OrfB | |||
1067 | M | M.CfrNIH4ORF13725P (73% identity) | M.CfrB38ORF1067P | |
1068 | membrane protein | |||
1819 | hydrolase | |||
1820 | M | M.CfrPSVORF1941P (97% identity) | CCWGG | M.CfrB38ORF1820P |
1821 | V | V.CfrMH15ORF11700P (100% identity) | V.CfrB38ORF1820P | |
1822 | multidrug transporter | |||
1876 | 147 aa hypothetical protein | |||
1877 | M | M.Cpo1222ORF2230P (98% identity) | GATC | M.CfrB38ORF1877P |
1878 | 72 aa hypothetical protein | |||
2008 | 340 aa hypothetical protein | |||
2009 | M | M1.CfrF2119ORF6805P (98% identity) | GATC | M.CfrB38ORF2009P |
2010 | DNA methyltransferase | |||
2009 | DNA adenine methylase | |||
2010 | M | M2.CfrF2119ORF6805P (99% identity) | M.CfrB38ORF2010P | |
2011 | crossover junction endodeoxyribonuclease | |||
2863 | 94 aa hypothetical protein | |||
2864 | M | M.CfrB38ORF2936P (100% identity) | GATC | M.CfrB38ORF2864P |
2865 | 72 aa hypothetical protein | |||
2935 | 94 aa hypothetical protein | |||
2936 | M | M.CfrB38ORF2864P (100% identity) | GATC | M.CfrB38ORF2936P |
2937 | 72 aa hypothetical protein | |||
plasmid pOZ172 | ||||
5061 | 82 aa hypothetical protein | |||
5062 | M | M.Kqu645ORF56420P (100% identity) | M.CfrB38ORF5062P | |
5063 | 222 aa hypothetical protein | |||
5074 | IS1 transposase OrfB | |||
5075 | R | Eas1ORF25940P (99% identity) | CCWGG | CfrB38ORF5076P |
5076 | M | M.Eas1ORF25940P (100% identity) | CCWGG | M.CfrB38ORF5076P |
5077 | 712 aa hypothetical protein | |||
plasmid pOZ181 | ||||
6090 | DNA-binding protein | |||
6091 | M | M.Ssp15303ORFEP (100% identity) | M.CfrB38ORF6091P | |
6092 | 283 aa hypothetical protein | |||
6272 | 55 aa hypothetical protein | |||
6273 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.CfrB38DcmP |
6274 | nuclease |