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Putative Synechococcus species PCC 8807 RM systems
Ref: Liu,Z. et al. unpublished
REBASE ref # 22500
Sequence length: | GenBank #: | |
Chromosome: | 3,059,495 bp | CP016483 |
plasmid unnamed3: | 15,538 bp | CP016486 |
plasmid unnamed4: | 18,454 bp | CP016487 |
plasmid unnamed5: | 27,205 bp | CP016488 |
REBASE acronym: Ssp8807
Org_num: 20064
All begin AWQ24_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
11925 | 459 aa hypothetical protein | |||
11930 | M | M.AvaORF499P (83% identity) | M.Ssp8807ORF11930P | |
11935 | S | S.Ssp3221ORF5785P (45% identity) | S.Ssp8807ORF11930P | |
11940 | DNA polymerase subunit beta | |||
11945 | nucleotidyltransferase | |||
11950 | R | Asp90ORF12925P (58% identity) | Ssp8807ORF11930P | |
11955 | light-independent protochlorophyllide reductase | |||
plasmid unnamed3 | ||||
14750 | 109 aa hypothetical protein | |||
14755 | M | M.AquV (95% identity) | M.Ssp8807ORF14755P | |
14760 | S | S.Mae1339ORF6550P (48% identity) | S.Ssp8807ORF14755P | |
14765 | prevent-host-death protein | |||
14770 | twitching motility protein PilT | |||
14775 | R | AquVP (97% identity) | Ssp8807ORF14755P | |
14780 | transposase | |||
plasmid unnamed4 | ||||
14840 | 89 aa hypothetical protein | |||
14845 | R | Sst15041ORFEP (90% identity) | Ssp8807ORF14890P | |
14850 | 226 aa hypothetical protein | |||
14855 | 149 aa hypothetical protein | |||
14860 | 146 aa hypothetical protein | |||
14865 | S | S.Ssp7502ORFAP (47% identity) | S.Ssp8807ORF14890P | |
14870 | nucleotidyltransferase | |||
14875 | DNA polymerase subunit beta | |||
14880 | twitching motility protein PilT | |||
14885 | 71 aa hypothetical protein | |||
14890 | M | M.Sst15041ORFEP (86% identity) | M.Ssp8807ORF14890P | |
14895 | 233 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1895 | prevent-host-death family protein | |||
1900 | RM | AquII (100% identity) | Ssp8807ORF1900P | |
1905 | Tol biopolymer transporter periplasmic protein | |||
4350 | PleD protein | |||
4355 | M | M.Ssp11901ORF8340P (99% identity) | CGATCG | M.Ssp8807ORF4355P |
4360 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |||
8970 | delta-aminolevulinic acid dehydratase | |||
8975 | M | M.TorNK122ORF3310P (78% identity) | CAGCTG | M.Ssp8807ORF8975P |
??? | C | C.Lfu8579ORF4815P (62% identity) | C.Ssp8807ORF8975P | |
8980 | R | SspB12ORF12090P (85% identity) | CAGCTG | Ssp8807ORF8975P |
8985 | 206 aa hypothetical protein | |||
10870 | homoserine dehydrogenase | |||
10875 | RM | Ssp130192ORFDP (98% identity) | Ssp8807ORF10875P | |
10880 | 130 aa hypothetical protein | |||
11750 | 68 aa hypothetical protein | |||
11755 | RM | AquIV (86% identity) | Ssp8807ORF11755P | |
11760 | DUF2281 domain-containing protein | |||
plasmid unnamed5 | ||||
15040 | 125 aa hypothetical protein | |||
15045 | M | M.AquORF12P (89% identity) | M.Ssp8807ORF15045P | |
15050 | 353 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5100 | magnesium chelatase subunit H | |||
5105 | R | AquMrrP (99% identity) | Ssp8807MrrP | |
5110 | 3-oxoacyl-ACP synthase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8205 | PBS lyase | |||
8210 | M | M.Ssp73109ORF8305P (98% identity) | GATC | M.Ssp8807ORF8210P |
8215 | 124 aa hypothetical protein |