Salmonella enterica subsp. enterica CFSAN024760 |
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Putative Salmonella enterica subsp. enterica CFSAN024760 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 19164
Contig set: 4,847,319 bp
GenBank #: JWQS00000000 (NZ_JWQS00000000)
REBASE acronym: Sen24760
Org_num: 16270
All begin QS23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12095 | pseudogene | |||
| 12100 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen24760ORF12110P |
| 12105 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen24760ORF12110P |
| ??? | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen24760ORF12110P |
| 12115 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen24760ORF12110P |
| 12120 | molecular chaperone Tir | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23615 | 97 aa hypothetical protein | |||
| 23620 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen24760ORF23620P |
| 23625 | ATPase | |||
| 23205 | ribulose-phosphate 3-epimerase | |||
| 23210 | M | M.StyTDamP (100% identity) | GATC | M.Sen24760DamP |
| 23215 | cell division protein DamX | |||
| 20650 | membrane protein | |||
| 20655 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24760ORF20655P |
| 20660 | Fis family transcriptional regulator | |||
| 3685 | hydrolase | |||
| 3690 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen24760DcmP |
| 3695 | V | V.StyUK1DcmP (100% identity) | V.Sen24760DcmP | |
| 3700 | multidrug DMT transporter | |||
| 14595 | 82 aa hypothetical protein | |||
| 14600 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen24760ORF14600P |
| 14605 | methyltransferase | |||
| 10405 | 75 aa hypothetical protein | |||
| 10410 | M | M.Sen24759ORF9105P (100% identity) | GATC | M.Sen24760ORF10410P |
| 10415 | endonuclease | |||
| 10425 | damage-inducible protein DinI | |||
| 10430 | M | M.Sen24759ORF9125P (100% identity) | CGGCCG | M.Sen24760ORF10430P |
| 10435 | R | Sen24759ORF9125P (100% identity) | CGGCCG | Sen24760ORF10430P |
| 10440 | Presumed portal vertex protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12280 | 33 aa hypothetical protein | |||
| 12285 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen24760ORF12290P |
| 12290 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen24760ORF12290P |
| 12295 | sugar transporter | |||