|
Putative Shigella flexneri 2a str. 301 RM systems
Ref: Jin,Q. et al. Nucleic Acids Res. 30 (20), 4432-4441 (2002)
REBASE ref # 7651
Sequence length: | GenBank #: | |
Chromosome: | 4,607,202 bp | AE005674 (NC_004337) |
plasmid pCP301: | 221,618 bp | AF386526 (NC_004851) |
REBASE acronym: Sfl2
Org_num: 2310
All begin SF, SF_p
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4363 | 113 aa conserved hypothetical protein | |||
4364 | S | S.SflPE577ORF23095P (100% identity) | S.Sfl2ORF4365P | |
4365 | M | M.SflTORF4636P (99% identity) | M.Sfl2ORF4365P | |
4366 | R | SflTORF4636P (100% identity) | Sfl2ORF4365P | |
4367 | IS1 ORF1 | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2003 | transmembrane subunit | |||
2004 | V | V.SflTDcmP (100% identity) | V.Sfl2DcmP | |
2005 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl2DcmP |
2006 | pseudogene | |||
2871 | IS1 ORF1 | |||
??? | M | M.Kpn0157ORFAP (56% identity) | CCWGG | M.Sfl2ORFAP |
2872 | IS2 ORF2 | |||
3299 | site-specific DNA inversion stimulation factor; | |||
3300 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl2ORF3300P |
3301 | 75 aa conserved hypothetical protein | |||
3404 | D-ribulose-5-phosphate 3-epimerase | |||
3405 | M | M.SflTDamP (100% identity) | GATC | M.Sfl2DamP |
3406 | membrane protein | |||
plasmid pCP301 | ||||
197 | orf, hypothetical protein | |||
198 | M | M.SflP099ORF24190P (100% identity) | M.Sfl2ORF198P | |
199 | orf, conserved hypothetical protein |