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Putative Escherichia coli KLY RM systems
Ref: Fridman,O. et al. Nature (2014) In press
REBASE ref # 17912
Complete sequence: 4,718,545 bp
GenBank #: CP008801
REBASE acronym: EcoKLY
Org_num: 13394
All begin HQ24_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
22370 | endoribonuclease SymE | |||
22375 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoKLYORF22380P |
22380 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoKLYORF22380P |
??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoKLYORF22380P |
22390 | restriction endonuclease | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
9700 | multidrug DMT transporter | |||
9705 | V | V.SflFF64DcmP (100% identity) | V.EcoKLYDcmP | |
9710 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoKLYDcmP |
9715 | hydrolase | |||
14400 | 145 aa hypothetical protein | |||
14405 | M | M.SflN92ORF24820P (100% identity) | M.EcoKLYORF14405P | |
14410 | 73 aa hypothetical protein | |||
16775 | Fis family transcriptional regulator | |||
16780 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoKLYORF16780P |
16785 | 59 aa hypothetical protein | |||
17405 | ribulose-phosphate 3-epimerase | |||
17410 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoKLYDamP |
17415 | cell division protein DamX | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
22355 | 856 aa hypothetical protein | |||
22360 | R | SenHNK130McrCP (100% identity) | EcoKLYMcrCP | |
22365 | R | Msa17McrB2P (100% identity) | EcoKLYMcrBP | |
22370 | endoribonuclease SymE | |||
??? | DEAD/DEAH box helicase | |||
22390 | R | SenHNK130MrrP (100% identity) | EcoKLYMrrP | |
22395 | GTP-binding protein |